The Ethereum Wallet is synced to the network, and it is the most up to date version. But the address that was the beneficiary of the tokens when purchased does not have any tokens in the account on Ethereum Wallet.
The tokens are transferred according to etherscan though and the funds are forwarded to the correct address receiving the funds in the ethereum wallet.
I really have no idea why this is, and can't find any explanation on Github. I appreciate any help on fixing this problem.